The laboratories involved in the DYNAMO programme have produced over 400 publications since 2012, with 20% in high-impact journals (Impact Factor > 11) and a dozen patents and licences. For the 80 publications woth an impact factor > 11, over 60% resulted from international collaborations with over 100 international laboratories (>50 from Europe) including some prestigious institutions like the University of Chicago (USA), University of Cambridge (UK), the Max Plack Institute and the Ludwig Maximilians University Munich (Germany), the National Cancer Institute, NIH (USA), the Icahn School of Medicine at Mount Sinai, New York (USA), the University of Liège (Belgium), Okayama University (Japan), the University of Wisconsin-Madison (USA), the University of British Columbia in Vancouver (Canada)

Alsayyah, Cynthia, Oznur Ozturk, Laetitia Cavellini, Naïma Belgareh-Touzé, and Mickael M. Cohen. 2020. “The Regulation of Mitochondrial Homeostasis by the Ubiquitin Proteasome System.” Biochimica et Biophysica Acta (BBA) - Bioenergetics 1861 (12): 148302.
Beauzamy, Léna, Jérôme Delacotte, Benjamin Bailleul, Kenya Tanaka, Shuji Nakanishi, Francis-André Wollman, and Frédéric Lemaître. 2020. “Mediator-Microorganism Interaction in Microbial Solar Cell: A Fluo-Electrochemical Insight.” Analytical Chemistry 92 (11): 7532–39.
Beauzamy, Léna, Frédéric Lemaître, and Julien Derr. 2020. “Underlying Mechanisms in Microbial Solar Cells: How Modeling Can Help.” Sustainable Energy & Fuels 4 (12): 6004–10.
Bimai, Ornella, Simon Arragain, and Béatrice Golinelli-Pimpaneau. 2020. “Structure-Based Mechanistic Insights into Catalysis by TRNA Thiolation Enzymes.” Current Opinion in Structural Biology 65 (December): 69–78.
Bujaldon, Sandrine, Natsumi Kodama, Mithun Kumar Rathod, Nicolas Tourasse, Shin-Ichiro Ozawa, Julien Sellés, Olivier Vallon, Yuichiro Takahashi, and Francis-André Wollman. 2020. “The BF4 and P71 Antenna Mutants from Chlamydomonas Reinhardtii.” Biochimica Et Biophysica Acta. Bioenergetics 1861 (4): 148085.
Cai, Yiming, Ben Usher, Claude Gutierrez, Anastasia Tolcan, Moise Mansour, Peter C. Fineran, Ciarán Condon, Olivier Neyrolles, Pierre Genevaux, and Tim R. Blower. 2020. “A Nucleotidyltransferase Toxin Inhibits Growth of Mycobacterium Tuberculosis through Inactivation of TRNA Acceptor Stems.” Science Advances 6 (31): eabb6651.
Caspari, Oliver D. 2020. “Introduction of a Leaky Stop Codon as Molecular Tool in Chlamydomonas Reinhardtii.” PLOS ONE 15 (8): e0237405.
Catala, Marjorie, Alexandre Gato, Carine Tisné, and Pierre Barraud. 2020. “1H, 15N Chemical Shift Assignments of the Imino Groups of Yeast TRNAPhe: Influence of the Post-Transcriptional Modifications.” Biomolecular NMR Assignments, April.
Catala, M., A. Gato, C. Tisné, and P. Barraud. 2020. “Yeast TRNAPhe Samples Preparation for NMR Spectroscopy.” Bio-Protocol In Press.
Cavaiuolo, Marina, Carine Chagneau, Soumaya Laalami, and Harald Putzer. 2020. “Impact of RNase E and RNase J on Global MRNA Metabolism in the Cyanobacterium Synechocystis PCC6803.” Frontiers in Microbiology 11.
Carpentier, Félix de, Jeanne Le Peillet, Nicolas D. Boisset, Pierre Crozet, Stéphane D. Lemaire, and Antoine Danon. 2020. “Blasticidin S Deaminase: A New Efficient Selectable Marker for Chlamydomonas Reinhardtii.” Frontiers in Plant Science 11.
Derreumaux, Philippe, Viet Hoang Man, Junmei Wang, and Phuong H. Nguyen. 2020. “Tau R3–R4 Domain Dimer of the Wild Type and Phosphorylated Ser356 Sequences. I. In Solution by Atomistic Simulations.” The Journal of Physical Chemistry B 124 (15): 2975–83.
Dezaire, Ambre, Christophe H. Marchand, Marine Vallet, Nathalie Ferrand, Soraya Chaouch, Elisabeth Mouray, Annette K. Larsen, et al. 2020. “Secondary Metabolites from the Culture of the Marine-Derived Fungus Paradendryphiella Salina PC 362H and Evaluation of the Anticancer Activity of Its Metabolite Hyalodendrin.” Marine Drugs 18 (4): 191.
Duboué-Dijon, E., M. Javanainen, P. Delcroix, P. Jungwirth, and H. Martinez-Seara. 2020. “A Practical Guide to Biologically Relevant Molecular Simulations with Charge Scaling for Electronic Polarization.” The Journal of Chemical Physics 153 (5): 050901.
Exner, Thomas E., Stefanie Becker, Simon Becker, Audrey Boniface-Guiraud, Philippe Delepelaire, Kay Diederichs, and Wolfram Welte. 2020. “Binding of HasA by Its Transmembrane Receptor HasR Follows a Conformational Funnel Mechanism.” European Biophysics Journal: EBJ 49 (1): 39–57.
Falciatore, Angela, Marianne Jaubert, Jean-Pierre Bouly, Benjamin Bailleul, and Thomas Mock. 2020. “Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity.” The Plant Cell 32 (3): 547–72.
Garrido, Clotilde, Oliver D. Caspari, Yves Choquet, Francis-André Wollman, and Ingrid Lafontaine. 2020. “Evidence Supporting an Antimicrobial Origin of Targeting Peptides to Endosymbiotic Organelles.” Cells 9 (8): 1795.
Gilet, Jules, Romain Conte, Claire Torchet, Lionel Benard, and Ingrid Lafontaine. 2020. “Additional Layer of Regulation via Convergent Gene Orientation in Yeasts.” Molecular Biology and Evolution 37 (2): 365–78.
Giusti, Fabrice, Marina Casiraghi, Elodie Point, Marjorie Damian, Jutta Rieger, Christel Le Bon, Alexandre Pozza, Karine Moncoq, Jean-Louis Banères, and Laurent J. Catoire. 2020. “Structure of the Agonist 12–HHT in Its BLT2 Receptor-Bound State.” Scientific Reports 10 (1): 1–13.
Hamouche, Lina, Cyrille Billaudeau, Anna Rocca, Arnaud Chastanet, Saravuth Ngo, Soumaya Laalami, and Harald Putzer. 2020. “Dynamic Membrane Localization of RNase Y in Bacillus Subtilis.” MBio 11 (1).
Henninger, Erin, and Maria T Teixeira. 2020. “Telomere-Driven Mutational Processes in Yeast.” Current Opinion in Genetics & Development, Cancer Genomics, 60 (February): 99–106.
Ignatov, Dmitriy, Karolis Vaitkevicius, Sylvain Durand, Laty Cahoon, Stefanie S. Sandberg, Xijia Liu, Birgitte H. Kallipolitis, et al. 2020. “An MRNA-MRNA Interaction Couples Expression of a Virulence Factor and Its Chaperone in Listeria Monocytogenes.” Cell Reports 30 (12): 4027-4040.e7.
Katava, M., M. Marchi, D. Madern, M. Sztucki, M. Maccarini, and F. Sterpone. 2020. “Temperature Unmasks Allosteric Propensity in a Thermophilic Malate Dehydrogenase via Dewetting and Collapse.” The Journal of Physical Chemistry B 124 (6): 1001–8.
Kawasaki, Takayasu, Viet Hoang Man, Yasunobu Sugimoto, Nobuyuki Sugiyama, Hiroko Yamamoto, Koichi Tsukiyama, Junmei Wang, Philippe Derreumaux, and Phuong H. Nguyen. 2020. “Infrared Laser-Induced Amyloid Fibril Dissociation: A Joint Experimental/Theoretical Study on the GNNQQNY Peptide.” The Journal of Physical Chemistry B 124 (29): 6266–77.
Laureanti, Joseph, Juan Brandi, Elvis Offor, David Engel, Robert Rallo, Bojana Ginovska, Xavier Martinez, Marc Baaden, and Nathan A. Baker. 2020. “Visualizing Biomolecular Electrostatics in Virtual Reality with UnityMol-APBS.” Protein Science: A Publication of the Protein Society 29 (1): 237–46.
Lejars, Maxence, and Eliane Hajnsdorf. 2020. “The World of AsRNAs in Gram-Negative and Gram-Positive Bacteria.” Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms 1863 (2): 194489.
Marconnet, Anaïs, Baptiste Michon, Christel Le Bon, Fabrice Giusti, Christophe Tribet, and Manuela Zoonens. 2020. “Solubilization and Stabilization of Membrane Proteins by Cycloalkane-Modified Amphiphilic Polymers.” Biomacromolecules, June.
Martinez, Xavier, Matthieu Chavent, and Marc Baaden. 2020. “Visualizing Protein Structures — Tools and Trends.” Biochemical Society Transactions 48 (2): 499–506.
Martins, Laura, Johannes Knuesting, Laetitia Bariat, Avilien Dard, Sven A. Freibert, Christophe Marchand, David Young, et al. 2020. “Redox Modification of the Fe-S Glutaredoxin GRXS17 Activates Holdase Activity and Protects Plants from Heat Stress.” Plant Physiology, January.
Migliore, Mattia, Andrea Bonvicini, Vincent Tognetti, Laure Guilhaudis, Marc Baaden, Hassan Oulyadi, Laurent Joubert, and Isabelle Ségalas-Milazzo. 2020. “Characterization of β-Turns by Electronic Circular Dichroism Spectroscopy: A Coupled Molecular Dynamics and Time-Dependent Density Functional Theory Computational Study.” Physical Chemistry Chemical Physics 22 (3): 1611–23.
Navickas, Albertas, Sébastien Chamois, Rénette Saint-Fort, Julien Henri, Claire Torchet, and Lionel Benard. 2020. “No-Go Decay MRNA Cleavage in the Ribosome Exit Tunnel Produces 5′-OH Ends Phosphorylated by Trl1.” Nature Communications 11 (1): 122.
Ngo, Son Tung, Phuong H. Nguyen, and Philippe Derreumaux. 2020. “Impact of A2T and D23N Mutations on Tetrameric Aβ42 Barrel within a Dipalmitoylphosphatidylcholine Lipid Bilayer Membrane by Replica Exchange Molecular Dynamics.” The Journal of Physical Chemistry B 124 (7): 1175–82.
Nguyen, Phuong H., and Philippe Derreumaux. 2020. “Structures of the Intrinsically Disordered Aβ, Tau and α-Synuclein Proteins in Aqueous Solution from Computer Simulations.” Biophysical Chemistry 264 (September): 106421.
Nguyen, Phuong H., Fabio Sterpone, and Philippe Derreumaux. 2020. “Chapter Nine - Aggregation of Disease-Related Peptides.” In Progress in Molecular Biology and Translational Science, edited by Birgit Strodel and Bogdan Barz, 170:435–60. Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly. Academic Press.
Ozawa, Shin-Ichiro, Marina Cavaiuolo, Domitille Jarrige, Richard Kuras, Mark Rutgers, Stephan Eberhard, Dominique Drapier, Francis-André Wollman, and Yves Choquet. 2020. “The OPR Protein MTHI1 Controls the Expression of Two Different Subunits of ATP Synthase CFo in Chlamydomonas Reinhardtii.” The Plant Cell 32 (4): 1179–1203.
Robescu, Marina Simona, Rudy Rubini, Elisa Beneventi, Michele Tavanti, Chiara Lonigro, Francesca Zito, Francesco Filippini, Laura Cendron, and Elisabetta Bergantino. 2020. “From the Amelioration of a NADP+-Dependent Formate Dehydrogenase to the Discovery of a New Enzyme: Round Trip from Theory to Practice.” ChemCatChem n/a (n/a).
Röder, Konstantin, Guillaume Stirnemann, Anne-Catherine Dock-Bregeon, David J Wales, and Samuela Pasquali. 2020. “Structural Transitions in the RNA 7SK 5′ Hairpin and Their Effect on HEXIM Binding.” Nucleic Acids Research 48 (1): 373–89.
Royes, Jorge, Valérie Biou, Nathalie Dautin, Christophe Tribet, and Bruno Miroux. 2020. “Inducible Intracellular Membranes: Molecular Aspects and Emerging Applications.” Microbial Cell Factories 19 (1): 176.
Signetti, Laurie, Nelli Elizarov, Méliné Simsir, Agnès Paquet, Dominique Douguet, Fabien Labbal, Delphine Debayle, et al. 2020. “Inhibition of Patched Drug Efflux Increases Vemurafenib Effectiveness against Resistant BrafV600E Melanoma.” Cancers 12 (6).
Šiková, Michaela, Jana Wiedermannová, Martin Převorovský, Ivan Barvík, Petra Sudzinová, Olga Kofroňová, Oldřich Benada, Hana Šanderová, Ciarán Condon, and Libor Krásný. 2020. “The Torpedo Effect in Bacillus Subtilis: RNase J1 Resolves Stalled Transcription Complexes.” The EMBO Journal 39 (3): e102500.
Tifrea, Delia F., Sukumar Pal, Christel le Bon, Melanie J. Cocco, Manuela Zoonens, and Luis M. de la Maza. 2020. “Improved Protection against Chlamydia Muridarum Using the Native Major Outer Membrane Protein Trapped in Resiquimod-Carrying Amphipols and Effects in Protection with Addition of a Th1 (CpG-1826) and a Th2 (Montanide ISA 720) Adjuvant.” Vaccine 38 (28): 4412–22.
Timr, Stepan, David Gnutt, Simon Ebbinghaus, and Fabio Sterpone. 2020. “The Unfolding Journey of Superoxide Dismutase 1 Barrels under Crowding: Atomistic Simulations Shed Light on Intermediate States and Their Interactions with Crowders.” The Journal of Physical Chemistry Letters 11 (10): 4206–12.
Timr, Stepan, Dominique Madern, and Fabio Sterpone. 2020. “Chapter Six - Protein Thermal Stability.” In Progress in Molecular Biology and Translational Science, edited by Birgit Strodel and Bogdan Barz, 170:239–72. Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly. Academic Press.
Trinquier, Aude, Sylvain Durand, Frédérique Braun, and Ciarán Condon. 2020. “Regulation of RNA Processing and Degradation in Bacteria.” Biochimica Et Biophysica Acta. Gene Regulatory Mechanisms 1863 (5): 194505.
Vo, Chau-Duy-Tam, Julie Michaud, Sylvie Elsen, Bruno Faivre, Emmanuelle Bouveret, Frédéric Barras, Marc Fontecave, Fabien Pierrel, Murielle Lombard, and Ludovic Pelosi. 2020. “The O2-Independent Pathway of Ubiquinone Biosynthesis Is Essential for Denitrification in Pseudomonas Aeruginosa.” BioRxiv, March, 2020.03.22.002311.
Zhou, Jingjing, Ludovic Pecqueur, Agota Aučynaitė, Jonathan Fuchs, Rasa Rutkienė, Justas Vaitekūnas, Rolandas Meškys, et al. 2020. “Structural Evidence for a [4Fe-5S] Intermediate in the Non-Redox Desulfuration of Thiouracil.” Angewandte Chemie International Edition n/a (n/a).

Asadi-Atoi, Paria, Pierre Barraud, Carine Tisne, and Stefanie Kellner. 2019. “Benefits of Stable Isotope Labeling in RNA Analysis.” Biological Chemistry 400 (7): 847–65.
Baaden, Marc. 2019. “Visualizing Biological Membrane Organization and Dynamics.” Journal of Molecular Biology 431 (10): 1889–1919.
Barraud, Pierre, and Carine Tisné. 2019. “To Be or Not to Be Modified: Miscellaneous Aspects Influencing Nucleotide Modifications in TRNAs.” IUBMB Life 71 (8): 1126–40.
Barraud, Pierre, Alexandre Gato, Matthias Heiss, Marjorie Catala, Stefanie Kellner, and Carine Tisné. 2019. “Time-Resolved NMR Monitoring of TRNA Maturation.” Nature Communications 10 (1): 3373.
Barroso da Silva, Fernando Luís, Fabio Sterpone, and Philippe Derreumaux. 2019. “OPEP6: A New Constant-PH Molecular Dynamics Simulation Scheme with OPEP Coarse-Grained Force Field.” Journal of Chemical Theory and Computation 15 (6): 3875–88.
Bou-Nader, Charles, Ludovic Pecqueur, Pierre Barraud, Marc Fontecave, Carine Tisné, Sophie Sacquin-Mora, and Djemel Hamdane. 2019. “Conformational Stability Adaptation of a Double-Stranded RNA-Binding Domain to Transfer RNA Ligand.” Biochemistry 58 (20): 2463–73.
Bou-Nader, Charles, Pierre Barraud, Ludovic Pecqueur, Javier Pérez, Christophe Velours, William Shepard, Marc Fontecave, Carine Tisné, and Djemel Hamdane. 2019. “Molecular Basis for Transfer RNA Recognition by the Double-Stranded RNA-Binding Domain of Human Dihydrouridine Synthase 2.” Nucleic Acids Research 47 (6): 3117–26.
Boyer, Benjamin, Claudia Danilowicz, Mara Prentiss, and Chantal Prévost. 2019. “Weaving DNA Strands: Structural Insight on ATP Hydrolysis in RecA-Induced Homologous Recombination.” Nucleic Acids Research 47 (15): 7798–7808.
Brandner, Astrid, Dario De Vecchis, Marc Baaden, Mickael M. Cohen, and Antoine Taly. 2019. “Physics-Based Oligomeric Models of the Yeast Mitofusin Fzo1 at the Molecular Scale in the Context of Membrane Docking.” Mitochondrion 49: 234–44.
Brandner, Astrid, Dario De Vecchis, Marc Baaden, Mickael M. Cohen, and Antoine Taly. 2019. “Structural Dataset from Microsecond-Long Simulations of Yeast Mitofusin Fzo1 in the Context of Membrane Docking.” Data in Brief 26 (October): 104460.
Caillet, Joël, Bruno Baron, Irina V. Boni, Célia Caillet-Saguy, and Eliane Hajnsdorf. 2019. “Identification of Protein-Protein and Ribonucleoprotein Complexes Containing Hfq.” Scientific Reports 9 (1): 14054.
Casiraghi, Marina, Elodie Point, Alexandre Pozza, Karine Moncoq, Jean-Louis Banères, and Laurent J. Catoire. 2019. “NMR Analysis of GPCR Conformational Landscapes and Dynamics.” Molecular and Cellular Endocrinology 484: 69–77.
Chiricotto, Mara, Simone Melchionna, Philippe Derreumaux, and Fabio Sterpone. 2019. “Multiscale Aggregation of the Amyloid Aβ16-22 Peptide: From Disordered Coagulation and Lateral Branching to Amorphous Prefibrils.” The Journal of Physical Chemistry Letters 10 (7): 1594–99.
Dautant, Alain, Julien Henri, Thomas E. Wales, Philippe Meyer, John R. Engen, and Florian Georgescauld. 2019. “Remodeling of the Binding Site of Nucleoside Diphosphate Kinase Revealed by X-Ray Structure and H/D Exchange.” Biochemistry 58 (10): 1440–49.
Carpentier, Félix de, Stéphane D. Lemaire, and Antoine Danon. 2019. “When Unity Is Strength: The Strategies Used by Chlamydomonas to Survive Environmental Stresses.” Cells 8 (11).
De Mia, Marcello, Stéphane D. Lemaire, Yves Choquet, and Francis-André Wollman. 2019. “Nitric Oxide Remodels the Photosynthetic Apparatus upon S-Starvation in Chlamydomonas Reinhardtii.” Plant Physiology 179 (2): 718–31.
De Vecchis, Dario, Astrid Brandner, Marc Baaden, Mickael M. Cohen, and Antoine Taly. 2019. “A Molecular Perspective on Mitochondrial Membrane Fusion: From the Key Players to Oligomerization and Tethering of Mitofusin.” The Journal of Membrane Biology 252 (4–5): 293–306.
Dégut, Clément, Martine Roovers, Pierre Barraud, Franck Brachet, André Feller, Valéry Larue, Abdalla Al Refaii, Joël Caillet, Louis Droogmans, and Carine Tisné. 2019. “Structural Characterization of B. Subtilis M1A22 TRNA Methyltransferase TrmK: Insights into TRNA Recognition.” Nucleic Acids Research 47 (9): 4736–50.
Delepelaire, Philippe. 2019. “Bacterial ABC Transporters of Iron Containing Compounds.” Research in Microbiology 170 (8): 345–57.
Eberhard, Stephan, Sona Valuchova, Julie Ravat, Jaroslav Fulneček, Pascale Jolivet, Sandrine Bujaldon, Stéphane D. Lemaire, et al. 2019. “Molecular Characterization of Chlamydomonas Reinhardtii Telomeres and Telomerase Mutants.” Life Science Alliance 2 (3).
Esmenjaud, Jean-Baptiste, David Stroebel, Kelvin Chan, Teddy Grand, Mélissa David, Lonnie P. Wollmuth, Antoine Taly, and Pierre Paoletti. 2019. “An Inter-Dimer Allosteric Switch Controls NMDA Receptor Activity.” The EMBO Journal 38 (2).
F Brandner, Astrid, Stepan Timr, Simone Melchionna, Philippe Derreumaux, Marc Baaden, and Fabio Sterpone. 2019. “Modelling Lipid Systems in Fluid with Lattice Boltzmann Molecular Dynamics Simulations and Hydrodynamics.” Scientific Reports 9 (1): 16450.
Fernandez, Marion, and Jacqueline Plumbridge. 2019. “Complex Synergistic Amino Acid-Nucleotide Interactions Contribute to the Specificity of NagC Operator Recognition and Induction.” Microbiology (Reading, England) 165 (7): 792–803.
Findinier, Justin, Cédric Delevoye, and Mickael M. Cohen. 2019. “The Dynamin-like Protein Fzl Promotes Thylakoid Fusion and Resistance to Light Stress in Chlamydomonas Reinhardtii.” PLoS Genetics 15 (3): e1008047.
Gervason, Sylvain, Djabir Larkem, Amir Ben Mansour, Thomas Botzanowski, Christina S. Müller, Ludovic Pecqueur, Gwenaelle Le Pavec, et al. 2019. “Physiologically Relevant Reconstitution of Iron-Sulfur Cluster Biosynthesis Uncovers Persulfide-Processing Functions of Ferredoxin-2 and Frataxin.” Nature Communications 10 (1): 3566.
Gnutt, David, Stepan Timr, Jonas Ahlers, Benedikt König, Emily Manderfeld, Matthias Heyden, Fabio Sterpone, and Simon Ebbinghaus. 2019. “Stability Effect of Quinary Interactions Reversed by Single Point Mutations.” Journal of the American Chemical Society 141 (11): 4660–69.
Gurrieri, Libero, Alessandra Del Giudice, Nicola Demitri, Giuseppe Falini, Nicolae Viorel Pavel, Mirko Zaffagnini, Maurizio Polentarutti, et al. 2019. “Arabidopsis and Chlamydomonas Phosphoribulokinase Crystal Structures Complete the Redox Structural Proteome of the Calvin-Benson Cycle.” Proceedings of the National Academy of Sciences of the United States of America 116 (16): 8048–53.
Hajj Chehade, Mahmoud, Ludovic Pelosi, Cameron David Fyfe, Laurent Loiseau, Bérengère Rascalou, Sabine Brugière, Katayoun Kazemzadeh, et al. 2019. “A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone.” Cell Chemical Biology 26 (4): 482-492.e7.
Jolivet, Pascale, Kamar Serhal, Marco Graf, Stephan Eberhard, Zhou Xu, Brian Luke, and Maria Teresa Teixeira. 2019. “A Subtelomeric Region Affects Telomerase-Negative Replicative Senescence in Saccharomyces Cerevisiae.” Scientific Reports 9 (1): 1845.
Kanonenberg, Kerstin, Jorge Royes, Alexej Kedrov, Gereon Poschmann, Federica Angius, Audrey Solgadi, Olivia Spitz, et al. 2019. “Shaping the Lipid Composition of Bacterial Membranes for Membrane Protein Production.” Microbial Cell Factories 18 (1): 131.
Laage, Damien, and Guillaume Stirnemann. 2019. “Effect of Ions on Water Dynamics in Dilute and Concentrated Aqueous Salt Solutions.” The Journal of Physical Chemistry. B 123 (15): 3312–24.
Lamrabet, Otmane, Jacqueline Plumbridge, Mikaël Martin, Richard E. Lenski, Dominique Schneider, and Thomas Hindré. 2019. “Plasticity of Promoter-Core Sequences Allows Bacteria to Compensate for the Loss of a Key Global Regulatory Gene.” Molecular Biology and Evolution 36 (6): 1121–33.
Law-Hine, Didier, Sergii Rudiuk, Audrey Bonestebe, Romain Ienco, Sylvain Huille, and Christophe Tribet. 2019. “Distinctive Low-Resolution Structural Features of Dimers of Antibody-Drug Conjugates and Parent Antibody Determined by Small-Angle X-Ray Scattering.” Molecular Pharmaceutics, October.
Lejars, Maxence, Asaki Kobayashi, and Eliane Hajnsdorf. 2019. “Physiological Roles of Antisense RNAs in Prokaryotes.” Biochimie 164 (September): 3–16.
Li, Chastity, Claudia Danilowicz, Tommy F. Tashjian, Veronica G. Godoy, Chantal Prévost, and Mara Prentiss. 2019. “The Positioning of Chi Sites Allows the RecBCD Pathway to Suppress Some Genomic Rearrangements.” Nucleic Acids Research 47 (4): 1836–46.
Lipońska, Anna, Farès Ousalem, Daniel P. Aalberts, John F. Hunt, and Grégory Boël. 2019. “The New Strategies to Overcome Challenges in Protein Production in Bacteria.” Microbial Biotechnology 12 (1): 44–47.
Lu, Yan, Xiao-Feng Shi, Phuong H. Nguyen, Fabio Sterpone, Freddie R. Salsbury, and Philippe Derreumaux. 2019. “Amyloid-β(29-42) Dimeric Conformations in Membranes Rich in Omega-3 and Omega-6 Polyunsaturated Fatty Acids.” The Journal of Physical Chemistry. B 123 (12): 2687–96.
Lu, Daniel, Claudia Danilowicz, Tommy F. Tashjian, Chantal Prévost, Veronica G. Godoy, and Mara Prentiss. 2019. “Slow Extension of the Invading DNA Strand in a D-Loop Formed by RecA-Mediated Homologous Recombination May Enhance Recognition of DNA Homology.” The Journal of Biological Chemistry 294 (21): 8606–16.
Ma, Wei, Christophe Tribet, Sylvain Guyot, and Dražen Zanchi. 2019. “Tannin-Controlled Micelles and Fibrils of κ-Casein.” The Journal of Chemical Physics 151 (24): 245103.
Majeran, Wojciech, Katia Wostrikoff, Francis-André Wollman, and Olivier Vallon. 2019. “Role of ClpP in the Biogenesis and Degradation of RuBisCO and ATP Synthase in Chlamydomonas Reinhardtii.” Plants (Basel, Switzerland) 8 (7).
Man, Viet Hoang, Mai Suan Li, Junmei Wang, Philippe Derreumaux, and Phuong H. Nguyen. 2019. “Interaction Mechanism between the Focused Ultrasound and Lipid Membrane at the Molecular Level.” The Journal of Chemical Physics 150 (21): 215101.
Man, Viet Hoang, Xibing He, Philippe Derreumaux, Beihong Ji, Xiang-Qun Xie, Phuong H. Nguyen, and Junmei Wang. 2019. “Effects of All-Atom Molecular Mechanics Force Fields on Amyloid Peptide Assembly: The Case of Aβ16-22 Dimer.” Journal of Chemical Theory and Computation 15 (2): 1440–52.
Man, Viet Hoang, Mai Suan Li, Junmei Wang, Philippe Derreumaux, and Phuong H. Nguyen. 2019. “Nonequilibrium Atomistic Molecular Dynamics Simulation of Tubular Nanomotor Propelled by Bubble Propulsion.” The Journal of Chemical Physics 151 (2): 024103.
Marchand, Christophe H., Simona Fermani, Jacopo Rossi, Libero Gurrieri, Daniele Tedesco, Julien Henri, Francesca Sparla, Paolo Trost, Stéphane D. Lemaire, and Mirko Zaffagnini. 2019. “Structural and Biochemical Insights into the Reactivity of Thioredoxin H1 from Chlamydomonas Reinhardtii.” Antioxidants (Basel, Switzerland) 8 (1).
Martinez, Xavier, Michael Krone, Naif Alharbi, Alexander S. Rose, Robert S. Laramee, Sean O’Donoghue, Marc Baaden, and Matthieu Chavent. 2019. “Molecular Graphics: Bridging Structural Biologists and Computer Scientists.” Structure (London, England: 1993) 27 (11): 1617–23.
Mason, Philip E., Pavel Jungwirth, and Elise Duboué-Dijon. 2019. “Quantifying the Strength of a Salt Bridge by Neutron Scattering and Molecular Dynamics.” The Journal of Physical Chemistry Letters 10 (12): 3254–59.
Nawrocki, W. J., B. Bailleul, P. Cardol, F. Rappaport, F.-A. Wollman, and P. Joliot. 2019. “Maximal Cyclic Electron Flow Rate Is Independent of PGRL1 in Chlamydomonas.” Biochimica Et Biophysica Acta. Bioenergetics 1860 (5): 425–32.
Nawrocki, W. J., B. Bailleul, D. Picot, P. Cardol, F. Rappaport, F.-A. Wollman, and P. Joliot. 2019. “The Mechanism of Cyclic Electron Flow.” Biochimica Et Biophysica Acta. Bioenergetics 1860 (5): 433–38.
Ngo, Son Tung, Philippe Derreumaux, and Van V. Vu. 2019. “Probable Transmembrane Amyloid α-Helix Bundles Capable of Conducting Ca2+ Ions.” The Journal of Physical Chemistry. B 123 (12): 2645–53.
Nguyen, Phuong H., Josep M. Campanera, Son Tung Ngo, Antoine Loquet, and Philippe Derreumaux. 2019. “Tetrameric Aβ40 and Aβ42 β-Barrel Structures by Extensive Atomistic Simulations. I. In a Bilayer Mimicking a Neuronal Membrane.” The Journal of Physical Chemistry. B 123 (17): 3643–48.

Abdelkrim, Yosser Zina, Emna Harigua-Souiai, Mourad Barhoumi, Josette Banroques, Arnaud Blondel, Ikram Guizani, and N. Kyle Tanner. 2018. “The Steroid Derivative 6-Aminocholestanol Inhibits the DEAD-Box Helicase EIF4A (LieIF4A) from the Trypanosomatid Parasite Leishmania by Perturbing the RNA and ATP Binding Sites.” Molecular and Biochemical Parasitology 226: 9–19.
Angius, Federica, Oana Ilioaia, Amira Amrani, Annabelle Suisse, Lindsay Rosset, Amélie Legrand, Abbas Abou-Hamdan, Marc Uzan, Francesca Zito, and Bruno Miroux. 2018. “A Novel Regulation Mechanism of the T7 RNA Polymerase Based Expression System Improves Overproduction and Folding of Membrane Proteins.” Scientific Reports 8 (1): 8572.
Aymé, Laure, Simon Arragain, Michel Canonge, Sébastien Baud, Nadia Touati, Ornella Bimai, Franjo Jagic, et al. 2018. “Arabidopsis Thaliana DGAT3 Is a [2Fe-2S] Protein Involved in TAG Biosynthesis.” Scientific Reports 8 (1): 17254.
Baaden, Marc, Olivier Delalande, Nicolas Ferey, Samuela Pasquali, Jérôme Waldispühl, and Antoine Taly. 2018. “Ten Simple Rules to Create a Serious Game, Illustrated with Examples from Structural Biology.” PLOS Computational Biology 14 (3): e1005955.
Barroso da Silva, Fernando Luís, Philippe Derreumaux, and Samuela Pasquali. 2018. “Protein-RNA Complexation Driven by the Charge Regulation Mechanism.” Biochemical and Biophysical Research Communications, Multiscale Modeling, 498 (2): 264–73.
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Casiraghi, Marina, Marjorie Damian, Ewen Lescop, Elodie Point, Karine Moncoq, Nelly Morellet, Daniel Levy, et al. 2016. “Functional Modulation of a G Protein-Coupled Receptor Conformational Landscape in a Lipid Bilayer.” Journal of the American Chemical Society 138 (35): 11170–75.
Chiricotto, Mara, Thanh Thuy Tran, Phuong H. Nguyen, Simone Melchionna, Fabio Sterpone, and Philippe Derreumaux. 2016. “Coarse-Grained and All-Atom Simulations towards the Early and Late Steps of Amyloid Fibril Formation.” Israel Journal of Chemistry, August, n/a-n/a.
Chiricotto, Mara, Fabio Sterpone, Philippe Derreumaux, and Simone Melchionna. 2016. “Multiscale Simulation of Molecular Processes in Cellular Environments.” Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences 374 (2080).
Chiricotto, Mara, Simone Melchionna, Philippe Derreumaux, and Fabio Sterpone. 2016. “Hydrodynamic Effects on β-Amyloid (16-22) Peptide Aggregation.” The Journal of Chemical Physics 145 (3): 035102.
Dahmane, Narimane, Danièle Gadelle, Stéphane Delmas, Alexis Criscuolo, Stephan Eberhard, Nicole Desnoues, Sylvie Collin, et al. 2016. “TopIb, a Phylogenetic Hallmark Gene of Thaumarchaeota Encodes a Functional Eukaryote-like Topoisomerase IB.” Nucleic Acids Research 44 (6): 2795–2805.
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DiChiara, Jeanne M., Bo Liu, Sabine Figaro, Ciarán Condon, and David H. Bechhofer. 2016. “Mapping of Internal Monophosphate 5’ Ends of Bacillus Subtilis Messenger RNAs and Ribosomal RNAs in Wild-Type and Ribonuclease-Mutant Strains.” Nucleic Acids Research 44 (7): 3373–89.
Fogeron, Thibault, Jean-Philippe Porcher, Maria Gomez-Mingot, Tanya K. Todorova, Lise-Marie Chamoreau, Caroline Mellot-Draznieks, Yun Li, and Marc Fontecave. 2016. “A Cobalt Complex with a Bioinspired Molybdopterin-like Ligand: A Catalyst for Hydrogen Evolution.” Dalton Transactions 45 (37): 14754–63.
Fontaine, Fanette, Elise Gasiorowski, Celine Gracia, Mathieu Ballouche, Joel Caillet, Antonin Marchais, and Eliane Hajnsdorf. 2016. “The Small RNA SraG Participates in PNPase Homeostasis.” RNA (New York, N.Y.) 22 (10): 1560–73.
Fortunato, Antonio Emidio, Marianne Jaubert, Gen Enomoto, Jean-Pierre Bouly, Raffaella Raniello, Michael Thaler, Shruti Malviya, et al. 2016. “Diatom Phytochromes Reveal the Existence of Far-Red-Light-Based Sensing in the Ocean.” The Plant Cell 28 (3): 616–28.
Frka-Petesic, B., D. Zanchi, N. Martin, S. Carayon, S. Huille, and C. Tribet. 2016. “Aggregation of Antibody Drug Conjugates at Room Temperature: SAXS and Light Scattering Evidence for Colloidal Instability of a Specific Subpopulation.” Langmuir 32 (19): 4848–61.
Goudy, Violaine, Jérôme Maynadié, Xavier Le Goff, Daniel Meyer, and Marc Fontecave. 2016. “Synthesis, Electrochemical and Spectroscopic Properties of Ruthenium( ii ) Complexes Containing 2,6-Di(1H-Imidazo[4,5-f][1,10]Phenanthrolin-2-Yl)Aryl Ligands.” New Journal of Chemistry 40 (2): 1704–14.
Guetle, Desiree D., Thomas Roret, Stefanie J. Mueller, Jeremy Couturier, Stephane D. Lemaire, Arnaud Hecker, Tiphaine Dhalleine, et al. 2016. “Chloroplast FBPase and SBPase Are Thioredoxin-Linked Enzymes with Similar Architecture but Different Evolutionary Histories.” Proceedings of the National Academy of Sciences of the United States of America 113 (24): 6779–84.
Hamdane, Djemel, Christophe Velours, David Cornu, Magali Nicaise, Murielle Lombard, and Marc Fontecave. 2016. “A Chemical Chaperone Induces Inhomogeneous Conformational Changes in Flexible Proteins.” Physical Chemistry Chemical Physics: PCCP 18 (30): 20410–21.
Hamdane, Djemel, Henri Grosjean, and Marc Fontecave. 2016. “Flavin-Dependent Methylation of RNAs: Complex Chemistry for a Simple Modification.” Journal of Molecular Biology 428 (24 Pt B): 4867–81.
Huan, Tran Ngoc, Philippe Simon, Anass Benayad, Laure Guetaz, Vincent Artero, and Marc Fontecave. 2016. “Cu/Cu2O Electrodes and CO2 Reduction to Formic Acid: Effects of Organic Additives on Surface Morphology and Activity.” Chemistry – A European Journal 22 (39): 14029–35.
Huan, Tran Ngoc, Praveen Prakash, Philippe Simon, Gwenaëlle Rousse, X. Xu, Vincent Artero, Edmond Gravel, Eric Doris, and Marc Fontecave. 2016. “CO2 Reduction to CO in Water: Carbon Nanotube–Gold Nanohybrid as a Selective and Efficient Electrocatalyst.” ChemSusChem 9 (17): 2317–20.
Ismail, Alexandre, Vincent Leroux, Myriam Smadja, Lucie Gonzalez, Murielle Lombard, Fabien Pierrel, Caroline Mellot-Draznieks, and Marc Fontecave. 2016. “Coenzyme Q Biosynthesis: Evidence for a Substrate Access Channel in the FAD-Dependent Monooxygenase Coq6.” PLoS Computational Biology 12 (1): e1004690.
Jagodnik, Jonathan, Denis Thieffry, and Maude Guillier. 2016. “Bacterial Small RNAs in Mixed Regulatory Circuits.” In Stress and Environmental Regulation of Gene Expression and Adaptation in Bacteria, edited by Frans J. de Bruijn, 369–82. John Wiley & Sons, Inc.
Katava, Marina, Maria Kalimeri, Guillaume Stirnemann, and Fabio Sterpone. 2016. “Stability and Function at High Temperature. What Makes a Thermophilic GTPase Different from Its Mesophilic Homologue.” The Journal of Physical Chemistry. B 120 (10): 2721–30.
Laurent, Benoist, Samuel Murail, Azadeh Shahsavar, Ludovic Sauguet, Marc Delarue, and Marc Baaden. 2016. “Sites of Anesthetic Inhibitory Action on a Cationic Ligand-Gated Ion Channel.” Structure (London, England: 1993) 24 (4): 595–605.
Longatte, G., F. Rappaport, F.-A. Wollman, M. Guille-Collignon, and F. Lemaître. 2016. “Mechanism and Analyses for Extracting Photosynthetic Electrons Using Exogenous Quinones - What Makes a Good Extraction Pathway?” Photochemical & Photobiological Sciences: Official Journal of the European Photochemistry Association and the European Society for Photobiology 15 (8): 969–79.
Malinge, Jeremy, Fanny Mousseau, Drazen Zanchi, Geoffrey Brun, Christophe Tribet, and Emmanuelle Marie. 2016. “Tailored Stimuli-Responsive Interaction between Particles Adjusted by Straightforward Adsorption of Mixed Layers of Poly(Lysine)-g-PEG and Poly(Lysine)-g-PNIPAM on Anionic Beads.” Journal of Colloid and Interface Science 461 (January): 50–55.
Mazur, Alexey K. 2016. “Homologous Pairing between Long DNA Double Helices.” Physical Review Letters 116 (15): 158101.
Nawrocki, Wojciech J., Stefano Santabarbara, Laura Mosebach, Francis-André Wollman, and Fabrice Rappaport. 2016. “State Transitions Redistribute Rather than Dissipate Energy between the Two Photosystems in Chlamydomonas.” Nature Plants 2 (April): 16031.
Nguyen, Phuong H., Fabio Sterpone, Ramon Pouplana, Philippe Derreumaux, and Josep M. Campanera. 2016. “Dimerization Mechanism of Alzheimer Aβ40 Peptides: The High Content of Intrapeptide-Stabilized Conformations in A2V and A2T Heterozygous Dimers Retards Amyloid Fibril Formation.” The Journal of Physical Chemistry. B 120 (47): 12111–26.
Nguyen, Phuong H., Fabio Sterpone, Josep M. Campanera, Jessica Nasica-Labouze, and Philippe Derreumaux. 2016. “Impact of the A2V Mutation on the Heterozygous and Homozygous Aβ1-40 Dimer Structures from Atomistic Simulations.” ACS Chemical Neuroscience 7 (6): 823–32.
Nilsson, Håkan, Laurent Cournac, Fabrice Rappaport, Johannes Messinger, and Jérôme Lavergne. 2016. “Estimation of the Driving Force for Dioxygen Formation in Photosynthesis.” Biochimica Et Biophysica Acta 1857 (1): 23–33.
Pérez-Pérez, María Esther, Stéphane D. Lemaire, and José L. Crespo. 2016. “Control of Autophagy in Chlamydomonas Is Mediated through Redox-Dependent Inactivation of the ATG4 Protease.” Plant Physiology 172 (4): 2219–34.
Porcher, Jean-Philippe, Thibault Fogeron, Maria Gomez-Mingot, Lise-Marie Chamoreau, Yun Li, and Marc Fontecave. 2016. “Synthesis and Reactivity of a Bio-Inspired Dithiolene Ligand and Its Mo Oxo Complex.” Chemistry (Weinheim an Der Bergstrasse, Germany) 22 (13): 4447–53.
Ruiz-Larrabeiti, Olatz, Ander Hernández Plágaro, Celine Gracia, Elena Sevillano, Lucía Gallego, Eliane Hajnsdorf, and Vladimir R. Kaberdin. 2016. “A New Custom Microarray for SRNA Profiling in Escherichia Coli.” FEMS Microbiology Letters 363 (13).
Stadlbauer, Petr, Liuba Mazzanti, Tristan Cragnolini, David J. Wales, Philippe Derreumaux, Samuela Pasquali, and Jiří Šponer. 2016. “Coarse-Grained Simulations Complemented by Atomistic Molecular Dynamics Provide New Insights into Folding and Unfolding of Human Telomeric G-Quadruplexes.” Journal of Chemical Theory and Computation 12 (12): 6077–97.
Takahashi, Hiroko, Stefan Schmollinger, Jae-Hyeok Lee, Michael Schroda, Fabrice Rappaport, Francis-André Wollman, and Olivier Vallon. 2016. “PETO Interacts with Other Effectors of Cyclic Electron Flow in Chlamydomonas.” Molecular Plant 9 (4): 558–68.
Tourasse, Nicolas J., Tommaso Barbi, Janet C. Waterhouse, Nastassia Shtaida, Stefan Leu, Sammy Boussiba, Saul Purton, and Olivier Vallon. 2016. “The Complete Sequence of the Chloroplast Genome of the Green Microalga Lobosphaera (Parietochloris) Incisa.” Mitochondrial DNA. Part A, DNA Mapping, Sequencing, and Analysis 27 (3): 2073–75.
Tran, Thanh Thuy, Phuong H. Nguyen, and Philippe Derreumaux. 2016. “Lattice Model for Amyloid Peptides: OPEP Force Field Parametrization and Applications to the Nucleus Size of Alzheimer’s Peptides.” The Journal of Chemical Physics 144 (20): 205103.
Verméglio, André, Jérôme Lavergne, and Fabrice Rappaport. 2016. “Connectivity of the Intracytoplasmic Membrane of Rhodobacter Sphaeroides: A Functional Approach.” Photosynthesis Research 127 (1): 13–24.
Warnet, Xavier L., Marwa Laadhari, Alexandre A. Arnold, Isabelle Marcotte, and Dror E. Warschawski. 2016. “A (2)H Magic-Angle Spinning Solid-State NMR Characterisation of Lipid Membranes in Intact Bacteria.” Biochimica Et Biophysica Acta 1858 (1): 146–52.
Wollman, Francis-André. 2016. “An Antimicrobial Origin of Transit Peptides Accounts for Early Endosymbiotic Events.” Traffic (Copenhagen, Denmark) 17 (12): 1322–28.
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Zambolin, Silvia, Bernard Clantin, Mohamed Chami, Sylviane Hoos, Ahmed Haouz, Vincent Villeret, and Philippe Delepelaire. 2016. “Structural Basis for Haem Piracy from Host Haemopexin by Haemophilus Influenzae.” Nature Communications 7 (May): 11590.
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Adamska-Venkatesh, Agnieszka, Souvik Roy, Judith F. Siebel, Trevor R. Simmons, Marc Fontecave, Vincent Artero, Edward Reijerse, and Wolfgang Lubitz. 2015. “Spectroscopic Characterization of the Bridging Amine in the Active Site of [FeFe] Hydrogenase Using Isotopologues of the H-Cluster.” Journal of the American Chemical Society 137 (40): 12744–47.
Adamska-Venkatesh, Agnieszka, Trevor R. Simmons, Judith F. Siebel, Vincent Artero, Marc Fontecave, Edward Reijerse, and Wolfgang Lubitz. 2015. “Artificially Maturated [FeFe] Hydrogenase from Chlamydomonas Reinhardtii: A HYSCORE and ENDOR Study of a Non-Natural H-Cluster.” Physical Chemistry Chemical Physics: PCCP 17 (7): 5421–30.
Artero, Vincent, Gustav Berggren, Mohamed Atta, Giorgio Caserta, Souvik Roy, Ludovic Pecqueur, and Marc Fontecave. 2015. “From Enzyme Maturation to Synthetic Chemistry: The Case of Hydrogenases.” Accounts of Chemical Research 48 (8): 2380–87.
Bailleul, Benjamin, Nicolas Berne, Omer Murik, Dimitris Petroutsos, Judit Prihoda, Atsuko Tanaka, Valeria Villanova, et al. 2015. “Energetic Coupling between Plastids and Mitochondria Drives CO2 Assimilation in Diatoms.” Nature 524 (7565): 366–69.
Banroques, Josette, and N. Kyle Tanner. 2015. “Bioinformatics and Biochemical Methods to Study the Structural and Functional Elements of DEAD-Box RNA Helicases.” Methods in Molecular Biology (Clifton, N.J.) 1259: 165–81.
Berthoumieu, Olivia, Phuong H. Nguyen, Maria P. Del Castillo-Frias, Sabrina Ferre, Bogdan Tarus, Jessica Nasica-Labouze, Sabrina Noël, et al. 2015. “Combined Experimental and Simulation Studies Suggest a Revised Mode of Action of the Anti-Alzheimer Disease Drug NQ-Trp.” Chemistry (Weinheim an Der Bergstrasse, Germany) 21 (36): 12657–66.
Bizebard, Thierry, and Marc Dreyfus. 2015. “A FRET-Based, Continuous Assay for the Helicase Activity of DEAD-Box Proteins.” Methods in Molecular Biology (Clifton, N.J.) 1259: 199–209.
Blaby, Ian K., Crysten E. Blaby-Haas, Maria Esther Perez-Perez, Stefan Schmollinger, Sorel Fitz-Gibbon, Stephane D. Lemaire, and Sabeeha S. Merchant. 2015. “Genome-Wide Analysis on Chlamydomonas Reinhardtii Reveals the Impact of Hydrogen Peroxide on Protein Stress Responses and Overlap with Other Stress Transcriptomes.” Plant Journal 84 (5): 974–88.
Bou-Nader, Charles, Ludovic Pecqueur, Damien Bregeon, Amina Kamah, Vincent Guérineau, Béatrice Golinelli-Pimpaneau, Beatriz G. Guimarães, Marc Fontecave, and Djemel Hamdane. 2015. “An Extended DsRBD Is Required for Post-Transcriptional Modification in Human TRNAs.” Nucleic Acids Research 43 (19): 9446–56.
Boulouis, Alix, Dominique Drapier, Hélène Razafimanantsoa, Katia Wostrikoff, Nicolas J. Tourasse, Kevin Pascal, Jacqueline Girard-Bascou, Olivier Vallon, Francis-André Wollman, and Yves Choquet. 2015. “Spontaneous Dominant Mutations in Chlamydomonas Highlight Ongoing Evolution by Gene Diversification.” The Plant Cell 27 (4): 984–1001.
Bourgeron, Thibault, Zhou Xu, Marie Doumic, and Maria Teresa Teixeira. 2015. “The Asymmetry of Telomere Replication Contributes to Replicative Senescence Heterogeneity.” Scientific Reports 5 (October): 15326.
Boyer, Benjamin, Johann Ezelin, Pierre Poulain, Adrien Saladin, Martin Zacharias, Charles H. Robert, and Chantal Prévost. 2015. “An Integrative Approach to the Study of Filamentous Oligomeric Assemblies, with Application to RecA.” PloS One 10 (3): e0116414.
Bréchemier-Baey, Dominique, Lenin Domínguez-Ramírez, Jacques Oberto, and Jacqueline Plumbridge. 2015. “Operator Recognition by the ROK Transcription Factor Family Members, NagC and Mlc.” Nucleic Acids Research 43 (1): 361–72.
Caserta, Giorgio, Souvik Roy, Mohamed Atta, Vincent Artero, and Marc Fontecave. 2015. “Artificial Hydrogenases: Biohybrid and Supramolecular Systems for Catalytic Hydrogen Production or Uptake.” Current Opinion in Chemical Biology 25 (April): 36–47.
Chakraborty, Debashree, Antoine Taly, and Fabio Sterpone. 2015. “Stay Wet, Stay Stable? How Internal Water Helps the Stability of Thermophilic Proteins.” The Journal of Physical Chemistry. B 119 (40): 12760–70.
Chambers, Matthew B., Xia Wang, Noémie Elgrishi, Christopher H. Hendon, Aron Walsh, Jonathan Bonnefoy, Jérôme Canivet, et al. 2015. “Photocatalytic Carbon Dioxide Reduction with Rhodium‐based Catalysts in Solution and Heterogenized within Metal–Organic Frameworks.” ChemSusChem 8 (4): 603–8.
Clowez, Sophie, Damien Godaux, Pierre Cardol, Francis-André Wollman, and Fabrice Rappaport. 2015. “The Involvement of Hydrogen-Producing and ATP-Dependent NADPH-Consuming Pathways in Setting the Redox Poise in the Chloroplast of Chlamydomonas Reinhardtii in Anoxia.” The Journal of Biological Chemistry 290 (13): 8666–76.
Condon, Ciarán. 2015. “Airpnp: Auto- and Integrated Regulation of Polynucleotide Phosphorylase.” Journal of Bacteriology 197 (24): 3748–50.
Cragnolini, Tristan, Philippe Derreumaux, and Samuela Pasquali. 2015. “Ab Initio RNA Folding.” Journal of Physics. Condensed Matter: An Institute of Physics Journal 27 (23): 233102.
Cragnolini, Tristan, Yoann Laurin, Philippe Derreumaux, and Samuela Pasquali. 2015. “Coarse-Grained HiRE-RNA Model for Ab Initio RNA Folding beyond Simple Molecules, Including Noncanonical and Multiple Base Pairings.” Journal of Chemical Theory and Computation 11 (7): 3510–22.
Cubellis, Maria Vittoria, Marc Baaden, and Giuseppina Andreotti. 2015. “Taming Molecular Flexibility to Tackle Rare Diseases.” Biochimie 113 (June): 54–58.
Damodaran, Shima P., Stephan Eberhard, Laurent Boitard, Jairo Garnica Rodriguez, Yuxing Wang, Nicolas Bremond, Jean Baudry, Jérôme Bibette, and Francis-André Wollman. 2015. “A Millifluidic Study of Cell-to-Cell Heterogeneity in Growth-Rate and Cell-Division Capability in Populations of Isogenic Cells of Chlamydomonas Reinhardtii.” PloS One 10 (3): e0118987.
Danilowicz, Claudia, Darren Yang, Craig Kelley, Chantal Prévost, and Mara Prentiss. 2015. “The Poor Homology Stringency in the Heteroduplex Allows Strand Exchange to Incorporate Desirable Mismatches without Sacrificing Recognition in Vivo.” Nucleic Acids Research 43 (13): 6473–85.
Doig, Andrew J., and Philippe Derreumaux. 2015. “Inhibition of Protein Aggregation and Amyloid Formation by Small Molecules.” Current Opinion in Structural Biology 30 (February): 50–56.
Durand, Sylvain, Frédérique Braun, Efthimia Lioliou, Cédric Romilly, Anne-Catherine Helfer, Laurianne Kuhn, Noé Quittot, Pierre Nicolas, Pascale Romby, and Ciarán Condon. 2015. “A Nitric Oxide Regulated Small RNA Controls Expression of Genes Involved in Redox Homeostasis in Bacillus Subtilis.” PLoS Genetics 11 (2): e1004957.
Durand, Sylvain, Arnaud Tomasini, Frédérique Braun, Ciarán Condon, and Pascale Romby. 2015. “SRNA and MRNA Turnover in Gram-Positive Bacteria.” FEMS Microbiology Reviews 39 (3): 316–30.
Elgrishi, Noémie, Sophie Griveau, Matthew B. Chambers, Fethi Bedioui, and Marc Fontecave. 2015. “Versatile Functionalization of Carbon Electrodes with a Polypyridine Ligand: Metallation and Electrocatalytic H+ and CO2 Reduction.” Chemical Communications 51 (14): 2995–98.
Elgrishi, Noémie, Matthew B. Chambers, and Marc Fontecave. 2015. “Turning It off! Disfavouring Hydrogen Evolution to Enhance Selectivity for CO Production during Homogeneous CO 2 Reduction by Cobalt–Terpyridine Complexes.” Chemical Science 6 (4): 2522–31.
Gilet, Laetitia, Jeanne M. DiChiara, Sabine Figaro, David H. Bechhofer, and Ciarán Condon. 2015. “Small Stable RNA Maturation and Turnover in Bacillus Subtilis.” Molecular Microbiology 95 (2): 270–82.
Giusti, Fabrice, Pascal Kessler, Randi Westh Hansen, Eduardo Antonio Della Pia, Christel Le Bon, Gilles Mourier, Jean-Luc Popot, Karen Laurence Martinez, and Manuela Zoonens. 2015. “Synthesis of a Polyhistidine-Bearing Amphipol and Its Use for Immobilizing Membrane Proteins.” Biomacromolecules, October.
Hamdane, Djemel, Charles Bou-Nader, David Cornu, Gaston Hui-Bon-Hoa, and Marc Fontecave. 2015. “Flavin-Protein Complexes: Aromatic Stacking Assisted by a Hydrogen Bond.” Biochemistry 54 (28): 4354–64.
Hattab, Georges, Dror E. Warschawski, Karine Moncoq, and Bruno Miroux. 2015. “Escherichia Coli as Host for Membrane Protein Structure Determination: A Global Analysis.” Scientific Reports 5 (July): 12097.
Hotto, Amber M., Benoît Castandet, Laetitia Gilet, Andrea Higdon, Ciarán Condon, and David B. Stern. 2015. “Arabidopsis Chloroplast Mini-Ribonuclease III Participates in RRNA Maturation and Intron Recycling.” The Plant Cell 27 (3): 724–40.
Huan, Tran Ngoc, Eugen S. Andreiadis, Jonathan Heidkamp, Philippe Simon, Etienne Derat, Saioa Cobo, Guy Royal, et al. 2015. “From Molecular Copper Complexes to Composite Electrocatalytic Materials for Selective Reduction of CO2 to Formic Acid.” Journal of Materials Chemistry A 3 (7): 3901–7.
Indrisiunaite, Gabriele, Michael Y. Pavlov, Valérie Heurgué-Hamard, and Måns Ehrenberg. 2015. “On the PH Dependence of Class-1 RF-Dependent Termination of MRNA Translation.” Journal of Molecular Biology 427 (9): 1848–60.
Jalal, Abdullah, Christian Schwarz, Christian Schmitz-Linneweber, Olivier Vallon, Jörg Nickelsen, and Alexandra-Viola Bohne. 2015. “A Small Multifunctional Pentatricopeptide Repeat Protein in the Chloroplast of Chlamydomonas Reinhardtii.” Molecular Plant 8 (3): 412–26.
Kalimeri, Maria, Philippe Derreumaux, and Fabio Sterpone. 2015. “Are Coarse-Grained Models Apt to Detect Protein Thermal Stability? The Case of OPEP Force Field.” Journal of Non-Crystalline Solids 407 (January): 494–501.
Laurent, Benoist, Matthieu Chavent, Tristan Cragnolini, Anna Caroline E. Dahl, Samuela Pasquali, Philippe Derreumaux, Mark S. P. Sansom, and Marc Baaden. 2015. “Epock: Rapid Analysis of Protein Pocket Dynamics.” Bioinformatics (Oxford, England) 31 (9): 1478–80.
Laurin, Yoann, Philippe Savarin, Charles H. Robert, Masayuki Takahashi, Joel Eyer, Chantal Prevost, and Sophie Sacquin-Mora. 2015. “Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40-63 Peptide on Tubulin.” Biochemistry 54 (23): 3660–69.
Longatte, Guillaume, Han-Yi Fu, Olivier Buriez, Eric Labbé, Francis-André Wollman, Christian Amatore, Fabrice Rappaport, Manon Guille-Collignon, and Frédéric Lemaître. 2015. “Evaluation of Photosynthetic Electrons Derivation by Exogenous Redox Mediators.” Biophysical Chemistry 205 (October): 1–8.
Martin, Nicolas, Juliette Ruchmann, and Christophe Tribet. 2015. “Prevention of Aggregation and Renaturation of Carbonic Anhydrase via Weak Association with Octadecyl- or Azobenzene-Modified Poly(Acrylate) Derivatives.” Langmuir 31 (1): 338–49.
Mazur, Alexey K., and D. L. Shepelyansky. 2015. “Algebraic Statistics of Poincaré Recurrences in a DNA Molecule.” Physical Review Letters 115 (18): 188104.
Moraga-Cid, Gustavo, Ludovic Sauguet, Christèle Huon, Laurie Malherbe, Christine Girard-Blanc, Stéphane Petres, Samuel Murail, et al. 2015. “Allosteric and Hyperekplexic Mutant Phenotypes Investigated on an Α1 Glycine Receptor Transmembrane Structure.” Proceedings of the National Academy of Sciences of the United States of America 112 (9): 2865–70.
Nasica-Labouze, Jessica, Phuong H. Nguyen, Fabio Sterpone, Olivia Berthoumieu, Nicolae-Viorel Buchete, Sébastien Coté, Alfonso De Simone, et al. 2015. “Amyloid β Protein and Alzheimer’s Disease: When Computer Simulations Complement Experimental Studies.” Chemical Reviews 115 (9): 3518–63.
Nawrocki, Wojciech J., Nicolas J. Tourasse, Antoine Taly, Fabrice Rappaport, and Francis-André Wollman. 2015. “The Plastid Terminal Oxidase: Its Elusive Function Points to Multiple Contributions to Plastid Physiology.” Annual Review of Plant Biology 66: 49–74.
Ozeir, Mohammad, Ludovic Pelosi, Alexandre Ismail, Caroline Mellot-Draznieks, Marc Fontecave, and Fabien Pierrel. 2015. “Coq6 Is Responsible for the C4-Deamination Reaction in Coenzyme Q Biosynthesis in Saccharomyces Cerevisiae.” The Journal of Biological Chemistry 290 (40): 24140–51.
Pérez, Serge, Thibault Tubiana, Anne Imberty, and Marc Baaden. 2015. “Three-Dimensional Representations of Complex Carbohydrates and Polysaccharides--SweetUnityMol: A Video Game-Based Computer Graphic Software.” Glycobiology 25 (5): 483–91.
Plumbridge, Jacqueline. 2015. “Regulation of the Utilization of Amino Sugars by Escherichia Coli and Bacillus Subtilis: Same Genes, Different Control.” Journal of Molecular Microbiology and Biotechnology 25 (2–3): 154–67.
Porcher, Jean-Philippe, Thibault Fogeron, Maria Gomez-Mingot, Etienne Derat, Lise-Marie Chamoreau, Yun Li, and Marc Fontecave. 2015. “A Bioinspired Molybdenum Complex as a Catalyst for the Photo- and Electroreduction of Protons.” Angewandte Chemie (International Ed. in English) 54 (47): 14090–93.
Rahaman, Obaidur, Maria Kalimeri, Simone Melchionna, Jérôme Hénin, and Fabio Sterpone. 2015. “Role of Internal Water on Protein Thermal Stability: The Case of Homologous G Domains.” The Journal of Physical Chemistry. B 119 (29): 8939–49.

Aussel, Laurent, Fabien Pierrel, Laurent Loiseau, Murielle Lombard, Marc Fontecave, and Frédéric Barras. 2014. “Biosynthesis and Physiology of Coenzyme Q in Bacteria.” Biochimica Et Biophysica Acta 1837 (7): 1004–11.
Benbahouche, Nour El Houda, Ioannis Iliopoulos, István Török, Joachim Marhold, Julien Henri, Andrey V. Kajava, Robert Farkaš, et al. 2014. “Drosophila Spag Is the Homolog of RNA Polymerase II-Associated Protein 3 (RPAP3) and Recruits the Heat Shock Proteins 70 and 90 (Hsp70 and Hsp90) during the Assembly of Cellular Machineries.” The Journal of Biological Chemistry 289 (9): 6236–47.
Boudry, P., C. Gracia, M. Monot, J. Caillet, L. Saujet, E. Hajnsdorf, B. Dupuy, I. Martin-Verstraete, and O. Soutourina. 2014. “Pleiotropic Role of the RNA Chaperone Protein Hfq in the Human Pathogen Clostridium Difficile.” Journal of Bacteriology 196 (18): 3234–48.
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